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PageMan
PageMan main site
Download Scavenger to convert MIPS FunCAt KEGG
KO or GeneOntology files
If you have SUN Java 1.5 or better
PageMan version 0.12b patch
Just replace the file ImageAnnotator.jar in your Pageman directory with this
file. This adds support for bin-wise averaging.
PageMan version 0.12
Mapping files, relating probe information to ontology:
Example files
Old versions
- PageMan version 0.11
- PageMan version 0.8
If you run out of memory or intent to do huge analysis (e.g. using GO) or
hundreds of arrays
add the following lines to your PageMan.lax
lax.nl.java.option.java.heap.size.max=1000m
lax.nl.java.option.java.heap.size.initial=500m
An update for Arabidopsis is expected later this month
TOM2 mapping file is released (new oligo based
platform)
Also we have switched to the latest Cornell SGN unigene mapping of
tomato unigenes
Soon to be released:
- Barley
- Potato
- Grape vine
- Maize