• MapMan
• Proteins
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• Mine Hvu
• Classify Genes
• Venn
• PageMan

If you use this tool please cite:
Usadel B et al. (2006) Pageman ... BMC Bioinformatics 2006, 7:535
You will get your genes classified by BINs. Please note that as BINs are hierarchical as indicated by dots "." in their Code, your genes will be counted several times in the hierarchy. For example you might have an rhamnose synthase, this would be counted towards Bins 10 (cell wall), 10.1 (cell wall.precursors), and 10.1.10 (cell wall.precursors.RHM). However, the number of genes in subbins doesn't necessarily add up to the number of genes in the parent bin, as duplicates are removed and some genes might just be roughly qualified.

Paste in your identifiers:

allowed characters a-z _ . 0-9
Other characters will be removed

	Your Genes	Control Group
ID Type	Gene Code Chip ID ------select --	user selected ATH1 TAIR7 genes TAIR8 genes Barley1 Affymetrix chip Rice Affymetrix chip Medicago Affymetrix chip CSB.DB NASC0271 CSB.DB ATGE0100 CSB.DB ATGE0200 CSB.DB ATGE0250 TOM1 chip Populus Affymetrix chip Wheat Affymetrix chip Soy Affymetrix chip Thellungiella	Control groups
Mapping File	Arabidopsis thaliana TAIR9 (Jan 10) Arabidopsis thaliana TAIR8 (December 06) Arabidopsis thaliana TAIR7 (June 07) Arabidopsis thaliana TAIR6 (August 06) Solanum esculentum Solanum tuberosum (April 07) Medicago truncatulata Chlamydomonas rheinhardtii (Nov 2007) Hordeum vulgare [barley] Feb 2008 Solanum esculentum (July 2009) Oryza sativa [rice] Sep 09 Medicago truncatula [barrel medic] (July 2009) Populus trichocarpa [poplar] (2009) Triticum aestivum [wheat] (2009) Glycine max [soy] (2009) Thellungiella (2011) ------------------------------select ------------------
Duplicates will be reomved
Graph	bars pie
Display	Show single genes

Recent Papers

Sreenivasulu N, Usadel B, Winter A, Radchuk V, Scholz U, Stein N, Weschke W, Strickert M, Close TJ, Stitt M, Graner A, Wobus U. Barley grain maturation and germination: metabolic pathway and regulatory network commonalities and differences highlighted by new MapMan/PageMan profiling tools. Plant Physiol. 146:1738-58. Usadel B, Nagel A, Steinhauser D, Gibon Y, Blasing OE, Redestig H, Sreenivasulu N, Krall L, Hannah MA, Poree F, Fernie AR, Stitt M (2006) PageMan: an interactive ontology tool to generate, display, and annotate overview graphs for profiling experiments. BMC Bioinformatics 7:535.